Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811766.1_cds_XP_016496857.1_11039
CDS Infomation

[gene=LOC107815743] [db_xref=GeneID:107815743] [protein=coatomer subunit delta-like] [protein_id=XP_016496857.1] [location=complement(join(8411..8581,8967..9063,9158..9220,10144..10297,10403..10595,12222..12526,18127..18307,18415..18657,18896..19119,21134..21173,21412..21414))] [gbkey=CDS]
Sequence

ATGGTTGTTCTAGCTGCGTCCATTATTTCTAAGTCAGGCAAAGCACTTGTCTCGAGGCAG
TTTGTTGATATGTCTCGTATAAGAATTGAAGGGTATCTTGCAGCCTTCCCCAAATTGGTT
GGAACAGGAAAGCAACATACCTATGTGGAGACTGAAAACGTGCGTTATGTTTATCAGCCA
ATTGAGTCTCTATACTTACTGCTTGTGACAAACAAACAGAGCAACATTCTTGAAGATTTG
GAGACACTGAGGCTGCTGTCTAAACTTGTGCCTGAATACTGTCATTGCTTAGATGAGGAG
GGAATCTCACAGACAGCTTTTGAGCTTATTTTTGCATTTGATGAGGTAATCTCTCTTGGG
CACAAGGAAAATGTTACCGTGGCACAAGTCAAGCAGTATGGTGAAATGGAGAGCCATGAA
GAGAAATTGCATAAGTTAGTCTTACAGAGCAAGATTAATGAAACTAAGGATGTCATGAAG
CGTAAAGCCAGTGAGATTGATAAAAGCAAGATAGAGAAGAATAGAGGTGAGAAAGGAGGT
TTCATGTCTCTGCAATCTATGGGTTCTGGAAGAATTGACACTGGCTTTGGCAGCAATACA
AACTTATCTAGCTTAGGAGGTGGTGGTTTTGGCAGTGGTTCTGGACTTGGACCAAGCACC
GATTTGGATTCATTTTCCACCAAATCCAAGGGTCGTCCAGCTGCATCTGCTACAGCTCCC
CCGAAAGGTCTTGGTATGCAGCTAGGTAAAACACAAAGGGCCAACCAATTTTTGGAATCC
CTGAAAGCTGAGGGTGAGGTCATTGTCGAAGATGTCAGACCAAGCATTGGTCAGTCCAAG
CCAGCTGCTCCACCACCAACTGATCCAGTCACACTGACTGTTGAAGAGAAGATTAATGTA
ACATTAAAGCGTGATGGCGGTATCGGCAACTTTGATGTGCAGGGTACCTTGTCTCTCCAA
ATTCTGAACCAAGAGGATGGATATATCCAAGTTCAGGTTGAAACCAGTGGTAATCCAGGC
ATCCTCTTCAAAACACACCCAAATATCAATAAGGAGTTATTTTCTAAGGAAAATATTCTA
GGCCTCAAAGATCCTAATAGGCCTTTTCCTGCTAATCAATCTGGTGACGGCGTTAATCTC
TTGAAGTGGAGAATGCAAAGTGCAGATGAGTCGATTTTACCCTTAACTATTAACTGCTGG
CCTTCAGTTTCTGGGAATGAAACCTATGTGAATATTGAGTATGAAACCCCAGCACAGATT
GATCTACAGAATGCCGTGATTTCTGTACCTCTCCCAGCTCTCAGGGAGGCCCCACGTATA
CAGCAGATTGATGGAGAGTGGAGGTATGATTCCAGAAATGCTGTTCTGGAGTGGTCTATA
GTTCTCATTGACAATTCTAATCGCAGTGGATCACTGGAATTTGTTGTTCCAGCAGCAGAT
CCTGATGTCTTCTTCCCAATTTCTGCCCGTTTTACTGCCTCAAGAACATTCAGTGACCTG
AAGGTTGCCAACATTCTGCCATTGAAAGGTGGANCCTTAGGAAAATTTTGGAACGTGGTC
ATGCTGAGAGATAGAAATGACGTTAAGTTCTTGTGCATCCATAGCTTAAGGATAATAAAC
GTTGACCAATCGATTTTGAGAGCATTTACCTGGGCTCCTGAGAATAAAGGTTAG

Peptide Sequence

PEP ID

XP_016496857.1
PEP Infomation

PREDICTED: coatomer subunit delta-like [Nicotiana tabacum]
Sequence

MVVLAASIISKSGKALVSRQFVDMSRIRIEGYLAAFPKLVGTGKQHTYVETENVRYVYQP
IESLYLLLVTNKQSNILEDLETLRLLSKLVPEYCHCLDEEGISQTAFELIFAFDEVISLG
HKENVTVAQVKQYGEMESHEEKLHKLVLQSKINETKDVMKRKASEIDKSKIEKNRGEKGG
FMSLQSMGSGRIDTGFGSNTNLSSLGGGGFGSGSGLGPSTDLDSFSTKSKGRPAASATAP
PKGLGMQLGKTQRANQFLESLKAEGEVIVEDVRPSIGQSKPAAPPPTDPVTLTVEEKINV
TLKRDGGIGNFDVQGTLSLQILNQEDGYIQVQVETSGNPGILFKTHPNINKELFSKENIL
GLKDPNRPFPANQSGDGVNLLKWRMQSADESILPLTINCWPSVSGNETYVNIEYETPAQI
DLQNAVISVPLPALREAPRIQQIDGEWRYDSRNAVLEWSIVLIDNSNRSGSLEFVVPAAD
PDVFFPISARFTASRTFSDLKVANILPLKGGXLGKFWNVVMLRDRNDVKFLCIHSLRIIN
VDQSILRAFTWAPENKG

Transcript Sequence

Gene sequence data has not been registered.